Plateau plant genome data collection (2015-2024)

Plateau plant genome data collection (2015-2024)


The rich habitat polymorphism of Qinghai Tibet Plateau makes it a treasure house of natural resources. There are special gene resources in plateau plants, such as cold resistance, drought resistance, salt resistance, UV radiation resistance, high light efficiency, etc. How to tap, utilize and establish functional gene resources with independent property rights has important potential application value for modern crop breeding in China. High quality chromosome level genomes provide a solid molecular basis for the analysis of plant adaptation mechanism, stress resistance gene mining and other related research. The contents of this data collection are: the genome data set of Euphorbiaceae Euphorbiaceae, Qinghai Xizang Euphorbiaceae, including chromosome level genome sequences and annotation files; The genome data set of the scions of Euphorbiaceae, including chromosome level genome sequences and annotation files; Genome data set of Euphorbiaceae single tree, including chromosome level genome sequence and annotation file; Genome data set of Sophora pseudoacacia in Leguminosae, including chromosome and genome sequence, annotation file.


File naming and required software

The genome dataset file includes two:
1. genome sequence file with the name of xxx FA, where XXX represents the Latin name of the species. Opening method: the file is a sequence text file, which can be opened by using the text opening software (e.g. EDITPLUS)
2. genome annotation file with the name of xxx GFF, where XXX represents the Latin name of the species. The opening method: open the software with text (e.g. EDITPLUS)


Data Citations Data citation guideline What's data citation?
Cite as:

Yang, Y. (2022). Plateau plant genome data collection (2015-2024). National Tibetan Plateau Data Center, DOI: 10.11888/Terre.tpdc.272670. CSTR: 18406.11.Terre.tpdc.272670. (Download the reference: RIS | Bibtex )

Using this data, the data citation is required to be referenced and the related literatures are suggested to be cited.


Support Program

Second Tibetan Plateau Scientific Expedition Program

Copyright & License

To respect the intellectual property rights, protect the rights of data authors,expand servglacials of the data center, and evaluate the application potential of data, data users should clearly indicate the source of the data and the author of the data in the research results generated by using the data (including published papers, articles, data products, and unpublished research reports, data products and other results). For re-posting (second or multiple releases) data, the author must also indicate the source of the original data.

Example of acknowledgement statement is included below: The data set is provided by National Tibetan Plateau Data Center (http://data.tpdc.ac.cn).


License: This work is licensed under an Attribution 4.0 International (CC BY 4.0)


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Keywords
Geographic coverage
East: 102.00 West: 97.00
South: 37.00 North: 42.00
Details
  • Temporal resolution: --
  • Spatial resolution: --
  • File size: 4,475 MB
  • Views: 399
  • Downloads: 1
  • Access: Requestable
  • Temporal coverage: 2020-06-30 To 2022-07-01
  • Updated time: 2022-06-27
Contacts
: YANG Yongping  

Distributor: National Tibetan Plateau Data Center

Email: data@itpcas.ac.cn

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